So, Jailbreakme made some major upgrades, was wondering, some people say they are having problems with it "automatically OkToPrep" and when you hit the windows.bat it says you need OkToPrep to continue? So would I have to download the package or is that only for some users?

I've only run into the "Must install Oktoprep" problem if you shift+clicked restore and went to 1.1.2, instead of shift+upgrade to 1.1.2.

Restoring will wipe all the changes made by Oktoprep.